Publications (December)

Park SW, Sun K, Champredon D, Li M, Bolker BM, Earn DJD, Weitz JS, Grenfell BT, Dushoff J. (2021) Forward-looking serial intervals correctly link epidemic growth to reproduction numbers. Proc Natl Acad Sci U S A. 118(2):e2011548118

Joshua S. Weitz, Sang Woo Park, Ceyhun Eksin, Jonathan Dushoff (2020) Awareness-driven behavior changes can shift the shape of epidemics away from peaks and toward plateaus, shoulders, and oscillations. Proceedings of the National Academy of Sciences Dec 2020, 117 (51) 32764-32771

RM Brooker, AL Seyfferth, A Hunter, JM Sneed, DL Dixson, ME Hay Human proximity suppresses fish recruitment by altering mangrove-associated odour cues. Scientific reports 10 (1), 1-9

Conan Y Zhao, Yiqi Hao, Yifei Wang, John J Varga, Arlene A Stecenko, Joanna B Goldberg, Sam P Brown. (2020) Microbiome data enhances predictive models of lung function in people with cystic fibrosis. The Journal of Infectious Diseases, jiaa655

Sheyda Azimi, LM Wheldon, NJ Oldfield, DAA Ala’Aldeen, KG Wooldridge (2020) A role for fibroblast growth factor receptor 1 in the pathogenesis of Neisseria meningitidis. Microbial Pathogenesis, Volume 149, Article 104534

CS Clements, AS Burns, FJ Stewart, ME Hay (2020) Parasite-host ecology: the limited impacts of an intimate enemy on host microbiomes. Animal Microbiome 2 (1), 1-13                         

Rachel Wilson, Anya Hopple, Malak M Tfaily, Cassandra Zalman, Eric Johnston, Caitlin Petro, Max Kolton, Tianze Song, Karis J McFarlane, Stephen Sebestyen, Natalie Griffiths, Randall K Kolka, Christopher W Schadt, Paul J Hanson, Jason Keller, Scott D Bridgham, Jeff Chanton, Joel E Kostka (2020) Plant Exudate-Soil Interactions Linked to Delayed Mineralization of Subsurface C Stores After 3 Years of Experimental Warming. AGU Fall Meeting 2020

Samantha J Mascuch, Sara Fakhretaha-Aval, Jessica C Bowman, Minh Thu H Ma, Gwendell Thomas, Bettina Bommarius, Chieri Ito, Liangjun Zhao, Gary P Newnam, Kavita R Matange, Hem R Thapa, Brett Barlow, Rebecca K Donegan, Nguyet A Nguyen, Emily G Saccuzzo, Chiamaka T Obianyor, Suneesh C Karunakaran, Pamela Pollet, Brooke Rothschild-Mancinelli, Santi Mestre-Fos, Rebecca Guth-Metzler, Anton V Bryksin, Anton S Petrov, Mallory Hazell, Carolyn B Ibberson, Petar I Penev, Robert G Mannino, Wilbur A Lam, Andrés J Garcia, Julia Kubanek, Vinayak Agarwal, Nicholas V Hud, Jennifer B Glass, Loren Dean Williams, Raquel L Lieberman (2020) A blueprint for academic laboratories to produce SARS-CoV-2 quantitative RT-PCR test kits. Journal of Biological Chemistry 295 (46), 15438-15453

JT Pentz, P Márquez-Zacarías, GO Bozdag, A Burnetti, PJ Yunker, E Libby, William C. Ratcliff (2020). Ecological advantages and evolutionary limitations of aggregative multicellular development. Current Biology 30 (21), 4155-4164. e6

Aroon Chande, Seolha Lee, Mallory Harris, Quan Nguyen, Stephen J Beckett, Troy Hilley, Clio Andris, Joshua S Weitz (2020). Real-time, interactive website for US-county-level COVID-19 event risk assessment. Nature Human Behaviour, 1-7

Publications (October)

Sheyda Azimi, LM Wheldon, NJ Oldfield, DAA Ala’Aldeen, KG Wooldridge (2020) A role for fibroblast growth factor receptor 1 in the pathogenesis of Neisseria meningitidis. Microbial Pathogenesis, Volume 149, Article 104534

Vanderwoude Jelly, Fleming Derek, Azimi Sheyda, Trivedi Urvish, Rumbaugh Kendra P. and Diggle Stephen P (2020) The evolution of virulence in Pseudomonas aeruginosa during chronic wound infection. Proc. R. Soc. B.28720202272

C Rose, AJ Medford, CF Goldsmith, T Vegge, J Weitz, AA Peterson (2020) Population Susceptibility Variation and Its Effect on Contagion Dynamics. arXiv preprint arXiv:2009.09150

KY Inagaki, MG Pennino, SR Floeter, ME Hay, GO Longo (2020) Trophic interactions will expand geographically but be less intense as oceans warm. Global Change Biology

AD Klementiev, Z Jin, M Whiteley (2020) Micron Scale Spatial Measurement of the O2 Gradient Surrounding a Bacterial Biofilm in Real Time. mBio 11 (5)

Publications (September)

SE Lester, A Rassweiler, S J McCoy, A K Dubel, M K Donovan, MW Miller, SD Miller, BI Ruttenberg, J F Samhouri, Mark E Hay (2020)Caribbean reefs of the Anthropocene: Variance in ecosystem metrics indicates bright spots on coral depauperate reefs. Global Change Biology 26 (9), 4785-4799

Om Prakash, Stefan J Green, Pooja Singh, Puja Jasrotia, Joel E Kostka (2020) Stress-related ecophysiology of members of the genus Rhodanobacter isolated from a mixed waste contaminated subsurface. Frontiers of Environmental Science & Engineering 15 (2), 1-9

Micah Dettweiler, Lewis Marquez, Michelle Lin, Anne M Sweeney-Jones, Bhuwan Khatri Chhetri, Daniel V Zurawski, Julia Kubanek, Cassandra L Quave (2020) Pentagalloyl glucose from Schinus terebinthifolia inhibits growth of carbapenem-resistant Acinetobacter baumannii. Scientific Reports 10 (1), 1-12

David Yanni, Shane Jacobeen, Pedro Márquez-Zacarías, Joshua S Weitz, William C Ratcliff, Peter J Yunker (2020) Topological constraints in early multicellularity favor reproductive division of labor. eLife 9, e54348

Jennifer T Pentz, Pedro Márquez-Zacarías, G Ozan Bozdag, Anthony Burnetti, Peter J Yunker, Eric Libby, William C Ratcliff (2020)Ecological advantages and evolutionary limitations of aggregative multicellular development. Cell Press

Noor Mruwat, Michael CG Carlson, Svetlana Goldin, François Ribalet, Shay Kirzner, Yotam Hulata, Stephen J Beckett, Dror Shitrit, Joshua S Weitz, E Virginia Armbrust, Debbie Lindell (2020) A single-cell polony method reveals low levels of infected Prochlorococcus in oligotrophic waters despite high cyanophage abundances. The ISME Journal, 1-14